Task:

The following three sequences are mRNA sequences that share high degrees of similarity with stretches of the 1500 bp human genomic clone.
  • Determine the exact location and structure of the gene by aligning the RNA sequences with the 1500 bp genomic DNA sequence.

Clone 1, 142 nt:

UGAGCACCGUGCUGACCUCCAAAUACCGUUAAGCUGGAGCCUCGGUGGCCAUGCUUCUUGCCCCUUGGGCCUCCCCCCAG CCCCUCCUCCCCUUCCUGCACCCGUACCCCCGUGGUCUUUGAAUAAAGUCUGAGUGGGCGGC

Clone 2, 263 nt:

ACUCUUCUGGUCCCCACAGACUCAGAGAGAACCCACCAUGGUGCUGUCUCCUGCCGACAAGACCAACGUCAAGGCCGCCU GGGGUAAGGUCGGCGCGCACGCUGGCGAGUAUGGUGCGGAGGCCCUGGAGAGGUGAGGCUCCCUCCCCUGCUCCGACCCG GGCUCCUCGCCCGCCCGGACCCACAGGCCACCCUCAACCGUCCUGGCCCCGGACCCAAACCCCACCCCUCACUCUGCUUC UCCCCGCAGGAUGUUCCUGUCCU

Clone 3, 603 nt:

AUGGUGCUGUCUCCUGCCGACAAGACCAACGUCAAGGCCGCCUGGGGUAAGGUCGGCGCGCACGCUGGCGAGUAUGGUGC GGAGGCCCUGGAGAGGAUGUUCCUGUCCUUCCCCACCACCAAGACCUACUUCCCGCACUUCGACCUGAGCCACGGCUCUG CCCAGGUUAAGGGCCACGGCAAGAAGGUGGCCGACGCGCUGACCAACGCCGUGGCGCACGUGGACGACAUGCCCAACGCG CUGUCCGCCCUGAGCGACCUGCACGCGCACAAGCUUCGGGUGGACCCGGUCAACUUCAAGCUCCUAAGCCACUGCCUGCU GGUGACCCUGGCCGCCCACCUCCCCGCCGAGUUCACCCCUGCGGUGCACGCCUCCCUGGACAAGUUCCUGGCUUCUGUGA GCACCGUGCUGACCUCCAAAUACCGUUAAGCUGGAGCCUCGGUGGCCAUGCUUCUUGCCCCUUGGGCCUCCCCCCAGCCC CUCCUCCCCUUCCUGCACCCGUACCCCCGUGGUCUUUGAAUAAAGUCUGAGUGGGAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA